Sunday, November 11, 2007

Researchers Simulate Photosynthesis, Design Better Leaf

Researchers successfully simulate photosynthesis and design a better leaf

University of Illinois researchers have built a better plant, one that produces more leaves and fruit without needing extra fertilizer. The researchers accomplished the feat using a computer model that mimics the process of evolution. Theirs is the first model to simulate every step of the photosynthetic process.

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Photosynthesis converts light energy into chemical energy in plants, algae, phytoplankton and some species of bacteria and archaea. Photosynthesis in plants involves an elaborate array of chemical reactions requiring dozens of protein enzymes and other chemical components. Most photosynthesis occurs in a plant’s leaves.

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It wasn’t feasible to tackle this question with experiments on actual plants, Long said. With more than 100 proteins involved in photosynthesis, testing one protein at a time would require an enormous investment of time and money.

“But now that we have the photosynthetic process ‘in silico,’ we can test all possible permutations on the supercomputer,” he said.

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Using “evolutionary algorithms,” which mimic evolution by selecting for desirable traits, the model hunted for enzymes that – if increased – would enhance plant productivity. If higher concentrations of an enzyme relative to others improved photosynthetic efficiency, the model used the results of that experiment as a parent for the next generation of tests.

This process identified several proteins that could, if present in higher concentrations relative to others, greatly enhance the productivity of the plant. The new findings are consistent with results from other researchers, who found that increases in one of these proteins in transgenic plants increased productivity.

“By rearranging the investment of nitrogen, we could almost double efficiency,” Long said.

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